Expansion of Genes Encoding piRNA-Associated Argonaute Proteins in the Pea Aphid: Diversification of Expression Profiles in Different Plastic Morphs
Identifieur interne : 006155 ( Main/Exploration ); précédent : 006154; suivant : 006156Expansion of Genes Encoding piRNA-Associated Argonaute Proteins in the Pea Aphid: Diversification of Expression Profiles in Different Plastic Morphs
Auteurs : Hsiao-Ling Lu [Taïwan] ; Sylvie Tanguy [France] ; Claude Rispe [France] ; Jean-Pierre Gauthier [France] ; Tom Walsh [Australie] ; Karl Gordon [Australie] ; Owain Edwards [Australie] ; Denis Tagu [France] ; Chun-Che Chang [Taïwan] ; Stéphanie Jaubert-Possamai [France]Source :
- PLoS ONE [ 1932-6203 ] ; 2011.
Abstract
Piwi-interacting RNAs (piRNAs) are known to regulate transposon activity in germ cells of several animal models that propagate sexually. However, the role of piRNAs during asexual reproduction remains almost unknown. Aphids that can alternate sexual and asexual reproduction cycles in response to seasonal changes of photoperiod provide a unique opportunity to study piRNAs and the piRNA pathway in both reproductive modes. Taking advantage of the recently sequenced genome of the pea aphid
Url:
DOI: 10.1371/journal.pone.0028051
PubMed: 22162754
PubMed Central: 3230593
Affiliations:
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wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Entomology/Institute of Biotechnology, College of Bioresources and Agriculture, National Taiwan University, Taipei, Taiwan</addr-line></nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Department of Entomology/Institute of Biotechnology, College of Bioresources and Agriculture, National Taiwan University, Taipei</wicri:regionArea><wicri:noRegion>Taipei</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Research Centre for Developmental Biology and Regenerative Medicine, National Taiwan University, Taipei, Taiwan</addr-line></nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Research Centre for Developmental Biology and Regenerative Medicine, National Taiwan University, Taipei</wicri:regionArea><wicri:noRegion>Taipei</wicri:noRegion></affiliation></author><author><name sortKey="Tanguy, Sylvie" sort="Tanguy, Sylvie" uniqKey="Tanguy S" first="Sylvie" last="Tanguy">Sylvie Tanguy</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu</wicri:regionArea><wicri:noRegion>Le Rheu</wicri:noRegion><wicri:noRegion>Le Rheu</wicri:noRegion></affiliation></author><author><name sortKey="Rispe, Claude" sort="Rispe, Claude" uniqKey="Rispe C" first="Claude" last="Rispe">Claude Rispe</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu</wicri:regionArea><wicri:noRegion>Le Rheu</wicri:noRegion><wicri:noRegion>Le Rheu</wicri:noRegion></affiliation></author><author><name sortKey="Gauthier, Jean Pierre" sort="Gauthier, Jean Pierre" uniqKey="Gauthier J" first="Jean-Pierre" last="Gauthier">Jean-Pierre Gauthier</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu</wicri:regionArea><wicri:noRegion>Le Rheu</wicri:noRegion><wicri:noRegion>Le Rheu</wicri:noRegion></affiliation></author><author><name sortKey="Walsh, Tom" sort="Walsh, Tom" uniqKey="Walsh T" first="Tom" last="Walsh">Tom Walsh</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>CSIRO (Commonwealth Scientific and Industrial Research Organisation) Ecosystem Sciences, Canberra, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>CSIRO (Commonwealth Scientific and Industrial Research Organisation) Ecosystem Sciences, Canberra</wicri:regionArea><wicri:noRegion>Canberra</wicri:noRegion></affiliation></author><author><name sortKey="Gordon, Karl" sort="Gordon, Karl" uniqKey="Gordon K" first="Karl" last="Gordon">Karl Gordon</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>CSIRO (Commonwealth Scientific and Industrial Research Organisation) Ecosystem Sciences, Canberra, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>CSIRO (Commonwealth Scientific and Industrial Research Organisation) Ecosystem Sciences, Canberra</wicri:regionArea><wicri:noRegion>Canberra</wicri:noRegion></affiliation></author><author><name sortKey="Edwards, Owain" sort="Edwards, Owain" uniqKey="Edwards O" first="Owain" last="Edwards">Owain Edwards</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>CSIRO Ecosystem Sciences, Wembley, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>CSIRO Ecosystem Sciences, Wembley</wicri:regionArea><wicri:noRegion>Wembley</wicri:noRegion></affiliation></author><author><name sortKey="Tagu, Denis" sort="Tagu, Denis" uniqKey="Tagu D" first="Denis" last="Tagu">Denis Tagu</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu</wicri:regionArea><wicri:noRegion>Le Rheu</wicri:noRegion><wicri:noRegion>Le Rheu</wicri:noRegion></affiliation></author><author><name sortKey="Chang, Chun Che" sort="Chang, Chun Che" uniqKey="Chang C" first="Chun-Che" last="Chang">Chun-Che Chang</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Department of Entomology/Institute of Biotechnology, College of Bioresources and Agriculture, National Taiwan University, Taipei, Taiwan</addr-line></nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Department of Entomology/Institute of Biotechnology, College of Bioresources and Agriculture, National Taiwan University, Taipei</wicri:regionArea><wicri:noRegion>Taipei</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Research Centre for Developmental Biology and Regenerative Medicine, National Taiwan University, Taipei, Taiwan</addr-line></nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Research Centre for Developmental Biology and Regenerative Medicine, National Taiwan University, Taipei</wicri:regionArea><wicri:noRegion>Taipei</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Genome and Systems Biology Degree Program, National Taiwan University, Taipei, Taiwan</addr-line></nlm:aff><country xml:lang="fr">Taïwan</country><wicri:regionArea>Genome and Systems Biology Degree Program, National Taiwan University, Taipei</wicri:regionArea><wicri:noRegion>Taipei</wicri:noRegion></affiliation></author><author><name sortKey="Jaubert Possamai, Stephanie" sort="Jaubert Possamai, Stephanie" uniqKey="Jaubert Possamai S" first="Stéphanie" last="Jaubert-Possamai">Stéphanie Jaubert-Possamai</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>UMR (Unité Mixte de Recherche) 1099 BiO3P (Biologie des Organismes et des Population appliquée à la Protection des Plantes) INRA (Institut National de la Rechercher Agronomique) – Agrocampus – Université Rennes1, Le Rheu</wicri:regionArea><wicri:noRegion>Le Rheu</wicri:noRegion><wicri:noRegion>Le Rheu</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Piwi-interacting RNAs (piRNAs) are known to regulate transposon activity in germ cells of several animal models that propagate sexually. However, the role of piRNAs during asexual reproduction remains almost unknown. Aphids that can alternate sexual and asexual reproduction cycles in response to seasonal changes of photoperiod provide a unique opportunity to study piRNAs and the piRNA pathway in both reproductive modes. Taking advantage of the recently sequenced genome of the pea aphid <italic>Acyrthosiphon pisum</italic>, we found an unusually large lineage-specific expansion of genes encoding the Piwi sub-clade of Argonaute proteins. <italic>In situ</italic> hybridisation showed differential expressions between the duplicated <italic>piwi</italic> copies: while <italic>Api-piwi2</italic> and <italic>Api-piwi6</italic> are “specialised” in germ cells their most closely related copy, respectively <italic>Api-piwi5</italic> and <italic>Api-piwi3</italic>, are expressed in the somatic cells. The differential expression was also identified in duplicated <italic>ago3</italic>: <italic>Api-ago3a</italic> in germ cells and <italic>Api-ago3b</italic> in somatic cells. Moreover, analyses of expression profiles of the expanded <italic>piwi</italic> and <italic>ago3</italic> genes by semi-quantitative RT-PCR showed that expressions varied according to the reproductive types. These specific expression patterns suggest that expanded aphid <italic>piwi</italic> and <italic>ago3</italic> genes have distinct roles in asexual and sexual reproduction.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Czech, B" uniqKey="Czech B">B Czech</name></author><author><name sortKey="Hannon, Gj" uniqKey="Hannon G">GJ Hannon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nowotny, M" uniqKey="Nowotny M">M Nowotny</name></author><author><name sortKey="Yang, W" uniqKey="Yang W">W Yang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Parker, Js" uniqKey="Parker J">JS Parker</name></author><author><name sortKey="Parizotto, Ea" uniqKey="Parizotto E">EA Parizotto</name></author><author><name sortKey="Wang, M" uniqKey="Wang M">M Wang</name></author><author><name sortKey="Roe, Sm" uniqKey="Roe S">SM Roe</name></author><author><name sortKey="Barford, D" 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Hsiao Ling" sort="Lu, Hsiao Ling" uniqKey="Lu H" first="Hsiao-Ling" last="Lu">Hsiao-Ling Lu</name></noRegion><name sortKey="Chang, Chun Che" sort="Chang, Chun Che" uniqKey="Chang C" first="Chun-Che" last="Chang">Chun-Che Chang</name><name sortKey="Chang, Chun Che" sort="Chang, Chun Che" uniqKey="Chang C" first="Chun-Che" last="Chang">Chun-Che Chang</name><name sortKey="Chang, Chun Che" sort="Chang, Chun Che" uniqKey="Chang C" first="Chun-Che" last="Chang">Chun-Che Chang</name><name sortKey="Lu, Hsiao Ling" sort="Lu, Hsiao Ling" uniqKey="Lu H" first="Hsiao-Ling" last="Lu">Hsiao-Ling Lu</name></country><country name="France"><noRegion><name sortKey="Tanguy, Sylvie" sort="Tanguy, Sylvie" uniqKey="Tanguy S" first="Sylvie" last="Tanguy">Sylvie Tanguy</name></noRegion><name sortKey="Gauthier, Jean Pierre" sort="Gauthier, Jean Pierre" uniqKey="Gauthier J" first="Jean-Pierre" last="Gauthier">Jean-Pierre Gauthier</name><name sortKey="Jaubert Possamai, Stephanie" sort="Jaubert Possamai, Stephanie" uniqKey="Jaubert Possamai S" first="Stéphanie" last="Jaubert-Possamai">Stéphanie Jaubert-Possamai</name><name sortKey="Rispe, Claude" sort="Rispe, Claude" uniqKey="Rispe C" first="Claude" last="Rispe">Claude Rispe</name><name sortKey="Tagu, Denis" sort="Tagu, Denis" uniqKey="Tagu D" first="Denis" last="Tagu">Denis Tagu</name></country><country name="Australie"><noRegion><name sortKey="Walsh, Tom" sort="Walsh, Tom" uniqKey="Walsh T" first="Tom" last="Walsh">Tom Walsh</name></noRegion><name sortKey="Edwards, Owain" sort="Edwards, Owain" uniqKey="Edwards O" first="Owain" last="Edwards">Owain Edwards</name><name sortKey="Gordon, Karl" sort="Gordon, Karl" uniqKey="Gordon K" first="Karl" last="Gordon">Karl Gordon</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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